Over at the NVIDIA Blog, Nefi Alarcon writes that Researchers from Stanford University have developed a deep learning based system that can automatically detect Alzheimer’s disease and its biomarkers from MRIs, with 94 percent accuracy.
Alzheimer’s disease is one of the most growing health issues, which devastated many lives, and the number of people with Alzheimer’s dementia is predicted to double within the next 20 years in the United States,” the researchers stated in their paper. “With the recent developments of deep learning and Convolutional Neural Network (CNN) algorithms in computer vision studies, many such methods are developed for medical imaging applications. However, the majority of such previous works mainly focused on segmentation, registration, landmark or lesion detection,” the team explained.
Using NVIDIA Tesla P100 GPUs and the cuDNN-accelerated TensforFlow deep learning frameworks, the team trained a 3D-convolutional neural network on a dataset from the Alzheimer’s Disease Neuroimaging Initiative. The neural network learned to interpret different regions of the brain and their association with the disease, including the biomarkers linked to Alzheimer’s disease.
Our method uses minimal preprocessing of MRIs (imposing minimum preprocessing artifacts) and utilizes a simple data augmentation strategy of downsampled MR images for training purposes,” the researchers stated in their paper.
The work resulted in the best classification performance compared to two other previous methods but also led to the discovery of relevant disease biomarkers.
3D-CNN architecture used in this paper. The blue cubes (L1, L2, L4, L5, L7,
and L8) are convolutional layers; Orange cubes (L3, L6, and L9) are max-pooling layers; and the last two layers are fully connected (FC) layers.
The team says the simplicity of their convolutional neural network resulted in better testing results. When compared to the other more complex architectures developed previously, this system is less prone to error, the researchers said.
We found the hippocampus region of the brain is critical in the diagnosis of Alzheimer’s. With an extensive hyperparameter tuning and exploiting the best model architecture for binary classification, we fine-tuned the resulting model for mild-cognitive impairment diagnosis as well.”
Download the Paper from ArXiv.
